STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCPL27Carboxypeptidase; Belongs to the peptidase S10 family. (458 aa)    
Predicted Functional Partners:
WRKY20
Putative WRKY family transcription factor family protein.
      
 0.497
TRFL2
Putative TRF-like 2.
   
 
 0.481
CBL9
Putative calcineurin B-like protein 9.
    
 
 0.476
A0A251RXC0
Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.461
ALFIN
Putative PHD finger protein Alfin1.
      
 0.461
AGL8
Putative agamous-like protein.
      
 0.461
A0A251TD79
Putative leucine-rich repeat protein, plant-type; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.461
A0A251U7I4
Putative leucine-rich receptor-like protein kinase family protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.461
A0A251UJ70
Putative leucine-rich repeat domain, L domain-like protein.
      
 0.461
A0A251UU69
Putative leucine-rich repeat protein, plant-type; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.461
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.