STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SL84Putative pyridoxal phosphate-dependent transferase, LL-diaminopimelate aminotransferase. (304 aa)    
Predicted Functional Partners:
A0A251V4D0
Putative pyridoxal-dependent decarboxylase family protein.
  
 
 0.759
A0A251SLM9
Putative diaminopimelate epimerase family protein.
  
 0.734
MTND1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
  
 
 0.642
crr1
Putative dihydrodipicolinate reductase, bacterial/plant.
    
 0.618
ARGJ
Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
  
 
 0.616
A0A251SNC3
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.525
A0A251VJ25
Putative 4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.525
A0A251V9A8
Homoserine dehydrogenase.
  
 0.512
AK3
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.507
A0A251S6F5
Putative ACT domain-containing protein.
  
 
 0.507
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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