STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATGGT-IBPutative prenyltransferase family protein. (360 aa)    
Predicted Functional Partners:
FNTA
Uncharacterized protein.
    
 0.996
AMS
Putative basic helix-loop-helix (BHLH) DNA-binding superfamily protein.
    
 
 0.654
A0A251S744
Putative outer membrane OMP85 family protein.
      
 0.585
FNTB
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 
0.522
A0A251RM27
Putative G-protein gamma-like domain-containing protein.
    
 
 0.512
PP7
Serine/threonine-protein phosphatase.
      
 0.493
A0A251VI03
Putative metallo-dependent phosphatase-like protein.
      
 0.493
A0A251SFT5
Uncharacterized protein.
      
 0.461
PLP
Putative PAS/LOV protein B.
      
 0.451
A0A251UKC5
Uncharacterized protein.
      
 0.451
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.