STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SMS7Uncharacterized protein. (317 aa)    
Predicted Functional Partners:
PSY1
Putative phytoene synthase 1 protein.
    
 
 0.565
PSY
Putative bifunctional 15-cis-phytoene synthase, chromoplastic.
    
 
 0.565
LCYB
Putative lycopene beta cyclase, chloroplastic/chromoplastic.
      
 0.529
A0A251STM9
Putative heat shock protein DnaJ, cysteine-rich domain-containing protein.
      
 0.524
zds
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
      
 0.523
Z-ISO
Putative 15-cis-zeta-carotene isomerase protein.
      
 0.519
A0A251TCU3
Putative heat shock protein DnaJ, cysteine-rich domain-containing protein.
      
 0.519
CRTSO
Putative prolycopene isomerase protein.
      
 0.519
LHCB4.2
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.513
A0A251VL19
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.510
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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