STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SPM7Putative zinc finger (CCCH-type) family protein. (378 aa)    
Predicted Functional Partners:
A0A251UJ25
Putative 3'-5'-exoribonuclease family protein.
    
  0.599
A0A251VLT3
Putative guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase.
    
  0.599
DCP2
Putative decapping 2.
   
 0.568
A0A251T0Q1
Putative D-aminoacyl-tRNA deacylase DtdA.
    
 0.550
GEK1
Putative D-aminoacyl-tRNA deacylase.
    
 0.550
ATRRP4
Putative ribosomal RNA processing 4.
    
 0.450
A0A251SBT0
Putative nucleic acid-binding, OB-fold-like protein.
     
 0.449
A0A251VTL3
Putative ribosomal protein S5 domain 2-like superfamily protein.
    
  0.447
A0A251SJ93
Putative winged helix-turn-helix DNA-binding domain, AT hook-like protein.
      
 0.402
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.