STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SQF5Putative WD40/YVTN repeat-like-containing domain-containing protein. (189 aa)    
Predicted Functional Partners:
A0A251S9R2
Putative LIM-domain binding protein/SEUSS.
    
 0.742
SEC13
Putative SEC13-like protein; Belongs to the WD repeat SEC13 family.
  
 
 0.634
A0A251RUF2
Putative transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
  
 
 0.611
A0A251VQK7
Putative B30.2/SPRY domain, Concanavalin A-like lectin/glucanase domain protein.
    
 0.599
A0A251RR84
Putative SNF2-related, N-terminal domain-containing protein.
    
 0.566
A0A251V685
Uncharacterized protein.
    
 0.566
A0A251T988
Putative WD40/YVTN repeat-like-containing domain-containing protein.
  
 
  0.561
A0A251TYJ3
Putative apoptotic protease-activating factor 1.
  
 
  0.560
A0A251UVP9
Putative coatomer alpha subunit.
  
 
  0.558
A0A251S7S5
Putative coatomer beta' subunit (COPB2).
  
 
  0.555
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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