STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SQK4Putative zinc finger, CCHC-type, Nucleotide-binding alpha-beta plait domain protein. (379 aa)    
Predicted Functional Partners:
A0A251SGS7
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.930
U1-70K
Putative U1 small nuclear ribonucleoprotein-70K.
   
 0.930
A0A251UCW9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.926
A0A251TX74
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 0.923
A0A251SCI0
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.917
A0A251U784
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.917
A0A251UPT9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
0.917
A0A251SL24
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.836
A0A251TM86
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.836
A0A251VD07
Putative nucleotide-binding alpha-beta plait domain-containing protein.
   
 0.836
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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