STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SSB6Putative harbinger transposase-derived protein. (440 aa)    
Predicted Functional Partners:
A0A251TYJ7
Putative nucleic acid binding protein.
    
 0.603
FAS1
Putative chromatin assembly factor-1.
    
 
 0.540
RING1B
Putative RING 1B.
    
 0.483
ATRING1A
Putative RING 1A.
    
 0.483
A0A251VKM0
Putative zinc finger, RING/FYVE/PHD-type.
    
 0.483
E2F1
Putative E2F transcription factor 1.
   
 0.446
A0A251SU73
Putative winged helix-turn-helix DNA-binding domain-containing protein.
   
 0.446
E2F3
Putative E2F transcription factor 3.
   
 0.446
A0A251UYD5
Putative winged helix-turn-helix DNA-binding domain-containing protein.
   
 0.446
A0A251VHX2
Putative winged helix-turn-helix DNA-binding domain-containing protein.
   
 0.446
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.