STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SW39Putative leucine-rich repeat protein, plant-type. (887 aa)    
Predicted Functional Partners:
A0A251RXY1
Uncharacterized protein.
    
  0.570
A0A251TSH8
Putative leucine-rich repeat domain, L domain-like protein.
  
     0.444
A0A251UYG1
Putative leucine-rich repeat domain, L domain-like protein.
  
     0.432
A0A251UG72
Putative ubiquitin-like superfamily protein.
    
  0.411
A0A251TXL6
Putative leucine-rich repeat domain, L domain-like protein.
  
 
   0.404
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.