STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SWC8Putative LMBR1-like membrane protein. (698 aa)    
Predicted Functional Partners:
A0A251TYV7
NUC153 domain-containing protein.
      
 0.541
A0A251RR20
Putative alkaline-phosphatase-like family protein.
      
 0.525
A0A251RWB9
Uncharacterized protein.
  
     0.487
A0A251SJD6
DUF4210 domain-containing protein.
      
 0.424
A0A251U0Y1
DUF4210 domain-containing protein.
      
 0.424
A0A251VA57
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.420
ATCSA-1
Putative transducin/WD40 repeat-like superfamily protein.
      
 0.418
A0A251SNP5
Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.
   
  
 0.410
A0A251VBF4
Putative cell division cycle protein 48-related / CDC48-related protein.
   
  
 0.410
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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