STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU2Putative RED family protein. (540 aa)    
Predicted Functional Partners:
A0A251SDD1
Putative LIS1 homology motif, CTLH LisH motif, Apoptotic protease-activating factor 1.
   
 0.958
A0A251UBY4
Putative WD40/YVTN repeat-like-containing domain-containing protein.
   
 0.958
SMU1
Putative transducin family protein / WD-40 repeat family protein.
   
 0.958
A0A251VMZ2
Putative pre-mRNA-splicing factor 38, Pre-mRNA-splicing factor 38.
   
 0.948
A0A251TED4
Putative micro-fibrillar-associated protein 1.
   
  0.930
A0A251VST6
Putative microfibrillar-associated protein-related protein.
   
  0.930
A0A251TM63
Putative C2H2 and C2HC zinc fingers superfamily protein.
   
  0.885
MEE5
Putative ribosomal protein S5/Elongation factor G/III/V family protein.
    
 
 0.862
YLS8
Putative mRNA splicing factor, thioredoxin-like U5 snRNP.
    
  0.799
A0A251VNB5
Putative mRNA splicing factor, thioredoxin-like U5 snRNP.
    
  0.799
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.