STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251T3X9Putative pyridoxal phosphate-dependent transferase. (824 aa)    
Predicted Functional Partners:
A0A251RW39
Putative NIF system FeS cluster assembly, NifU, Glycoside hydrolase.
  
 0.935
ISU1
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.935
ISU3
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.935
A0A251RMN0
Putative fe-S metabolism associated domain, SufE-like protein.
  
 0.877
A0A251UH91
Putative fe-S metabolism associated domain, SufE-like protein.
  
 0.877
ATNAP6
Putative non-intrinsic ABC protein 6.
  
 0.711
A0A251T8G2
Putative SUF system FeS cluster assembly, SufBD.
  
 0.711
A0A251UFF5
Putative SUF system FeS cluster assembly, SufBD.
  
 0.711
ATABC1-2
Putative ATP binding cassette protein.
  
 0.711
A0A251S484
Putative NAD(P)-binding Rossmann-fold superfamily protein.
    
 0.627
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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