STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRN35'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1041 aa)    
Predicted Functional Partners:
A0A251VAT4
Putative RAI1-like protein.
   
 
 0.913
A0A251SJD5
Putative ENTH/VHS family protein.
    
 
 0.768
A0A251TJU6
Putative ENTH/VHS.
    
 
 0.768
A0A251UU62
Putative ENTH/VHS family protein.
    
 
 0.768
CBP20
Nuclear cap-binding protein subunit 2.
    
 
 0.740
ACR3
Putative ACT domain repeat 3.
      
 0.699
A0A251UMR9
Putative ARM repeat superfamily protein.
   
 
  0.694
A0A251UGN4
Uncharacterized protein.
   
  0.682
A0A251T0Q1
Putative D-aminoacyl-tRNA deacylase DtdA.
    
 
 0.675
GEK1
Putative D-aminoacyl-tRNA deacylase.
    
 
 0.675
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.