STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251T5D9Putative ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family. (168 aa)    
Predicted Functional Partners:
RS27A
Putative ubiquitin-40S ribosomal protein S27a.
    
 0.948
A0A251T2C4
Putative zinc-binding ribosomal protein, Ubiquitin, Ubiquitin-related domain protein.
    
 0.948
A0A251U6N0
Putative ubiquitin/SUMO-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.938
A0A251UJ00
Putative ubiquitin/SUMO-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.938
A0A251UW00
Putative NAD(P)-binding domain-containing protein.
   
 0.938
A0A251UX69
Putative ubiquitin/SUMO-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
   
 0.938
ATUBA1
Putative ubiquitin-activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
   
 0.938
UBC13
Putative ubiquitin-conjugating enzyme 13; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.900
RBX1A
Putative RING-box protein 1A.
   
 0.885
A0A251SPF5
Uncharacterized protein.
   
 0.885
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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