STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSHCPutative DEAD-box ATP-dependent RNA helicase CshC. (330 aa)    
Predicted Functional Partners:
EIF3I
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.828
A0A251USL0
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.828
A0A251RSV6
Putative initiation factor eIF-4 gamma, MA3, Armadillo-type fold protein.
   
 0.761
A0A251S161
Putative initiation factor eIF-4 gamma, MA3, Armadillo-type fold protein.
   
 0.761
A0A251SI55
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.761
A0A251SL11
Putative initiation factor eIF-4 gamma, MA3, Armadillo-type fold protein.
   
 0.761
eIFiso4G1
Putative MIF4G domain-containing protein / MA3 domain-containing protein.
   
 0.761
A0A251T6Z5
Putative initiation factor eIF-4 gamma, MA3, Armadillo-type fold protein.
   
 0.761
A0A251TP56
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.761
A0A251TPY8
Putative initiation factor eIF-4 gamma, MA3, Armadillo-type fold protein.
   
 0.761
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.