A0A251T791 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251T791

Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase. (768 aa)

Predicted Functional Partners:

A0A251TA89

0.772

A0A251U9B9

0.701

A0A251TAU8

0.698

ATX3

0.675

A0A251STW7

0.675

A0A251RWW1

0.672

A0A251T9E9

0.672

A0A251UXC7

0.648

A0A251VPM2

0.648

A0A251T005

0.646

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251RWW1	A0A251STW7	A0A251RWW1	A0A251STW7	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	0.944
A0A251RWW1	A0A251T005	A0A251RWW1	A0A251T005	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	0.522
A0A251RWW1	A0A251T791	A0A251RWW1	A0A251T791	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	0.672
A0A251RWW1	A0A251TAU8	A0A251RWW1	A0A251TAU8	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	Putative binding protein.	0.865
A0A251RWW1	A0A251U9B9	A0A251RWW1	A0A251U9B9	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.965
A0A251STW7	A0A251RWW1	A0A251STW7	A0A251RWW1	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	0.944
A0A251STW7	A0A251T005	A0A251STW7	A0A251T005	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	0.886
A0A251STW7	A0A251T791	A0A251STW7	A0A251T791	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	0.675
A0A251STW7	A0A251T9E9	A0A251STW7	A0A251T9E9	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Putative nucleotide-binding alpha-beta plait domain-containing protein.	0.944
A0A251STW7	A0A251TAU8	A0A251STW7	A0A251TAU8	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Putative binding protein.	0.990
A0A251STW7	A0A251U9B9	A0A251STW7	A0A251U9B9	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.996
A0A251T005	A0A251RWW1	A0A251T005	A0A251RWW1	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	0.522
A0A251T005	A0A251STW7	A0A251T005	A0A251STW7	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	0.886
A0A251T005	A0A251T791	A0A251T005	A0A251T791	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	0.646
A0A251T005	A0A251T9E9	A0A251T005	A0A251T9E9	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Putative nucleotide-binding alpha-beta plait domain-containing protein.	0.522
A0A251T005	A0A251TAU8	A0A251T005	A0A251TAU8	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Putative binding protein.	0.783
A0A251T005	A0A251U9B9	A0A251T005	A0A251U9B9	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.816
A0A251T791	A0A251RWW1	A0A251T791	A0A251RWW1	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	Putative RNA-binding (RRM/RBD/RNP motifs) family protein.	0.672
A0A251T791	A0A251STW7	A0A251T791	A0A251STW7	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	0.675
A0A251T791	A0A251T005	A0A251T791	A0A251T005	Putative ATPase, AAA-type, core, P-loop containing nucleoside triphosphate hydrolase.	Putative helicase superfamily 1/2, ATP-binding domain-containing protein.	0.646