STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TDP6Putative short-chain dehydrogenase/reductase SDR. (112 aa)    
Predicted Functional Partners:
A0A251TKL1
Putative pyridoxal phosphate-dependent transferase, Aspartate 1-decarboxylase, pyridoxal-dependent.
     
 0.686
LCB2
Putative long chain base2.
     
 0.686
A0A251USS5
Putative pyridoxal phosphate-dependent transferase.
     
 0.686
LCB1B
Putative long chain base biosynthesis protein 1b.
     
 0.646
LCB1A
Putative long chain base biosynthesis protein 1a.
     
 0.646
A0A251UNH3
Putative pyridoxal phosphate-dependent transferase.
     
 0.646
A0A251UQK9
Putative pyridoxal phosphate-dependent transferase.
     
 0.646
ATLCB1
Putative long-chain base1.
     
 0.646
ATBIOF
Putative biotin F.
     
 0.574
CERK1
Putative ceramide kinase.
     
 0.530
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.