STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TFP4Putative coatomer beta' subunit (COPB2). (493 aa)    
Predicted Functional Partners:
A0A251RZV5
Putative zinc finger, RING/FYVE/PHD-type, WD40/YVTN repeat-like-containing domain protein.
  
0.951
COP1
Putative transducin/WD40 repeat-like superfamily protein.
  
0.951
DET1
Putative light-mediated development protein DET1.
  
  
 0.934
A0A251SS63
Putative cAMP response element binding (CREB) protein, Basic-leucine zipper domain protein.
    
 0.920
HY5
Putative transcription factor HY5.
    
 0.920
GI
Putative gigantea protein (GI).
     
 0.919
ATCSA-1
Putative transducin/WD40 repeat-like superfamily protein.
  
  
 0.916
A0A251SCI1
Putative WD40/YVTN repeat-like-containing domain-containing protein.
  
  
 
0.910
RUP2
Putative transducin/WD40 repeat-like superfamily protein.
  
  
 
0.910
DDB2
Putative damaged DNA binding 2.
     
 0.900
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.