A0A251THX0 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251THX0

Putative HRDC domain-containing protein. (163 aa)

Predicted Functional Partners:

A0A251STQ5

0.986

A0A251SBT0

0.985

ATRRP4

0.982

A0A251VTL3

0.982

A0A251SKY7

0.971

A0A251VJW5

0.971

A0A251S071

0.967

A0A251SGC7

0.967

CER7

0.967

A0A251UJ25

0.967

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251S071	A0A251SBT0	A0A251S071	A0A251SBT0	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative nucleic acid-binding, OB-fold-like protein.	0.995
A0A251S071	A0A251SGC7	A0A251S071	A0A251SGC7	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative sas10/U3 ribonucleoprotein (Utp) family protein.	0.948
A0A251S071	A0A251SKY7	A0A251S071	A0A251SKY7	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative transducin/WD40 repeat-like superfamily protein.	0.939
A0A251S071	A0A251STQ5	A0A251S071	A0A251STQ5	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative sas10/Utp3/C1D family.	0.995
A0A251S071	A0A251THX0	A0A251S071	A0A251THX0	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative HRDC domain-containing protein.	0.967
A0A251S071	A0A251UJ25	A0A251S071	A0A251UJ25	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative 3'-5'-exoribonuclease family protein.	0.992
A0A251S071	A0A251VJW5	A0A251S071	A0A251VJW5	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative U3 ribonucleoprotein (Utp) family protein.	0.953
A0A251S071	A0A251VTL3	A0A251S071	A0A251VTL3	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative ribosomal protein S5 domain 2-like superfamily protein.	0.996
A0A251S071	ATRRP4	A0A251S071	A0A251S501	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative ribosomal RNA processing 4.	0.996
A0A251S071	CER7	A0A251S071	A0A251SUY6	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	Putative 3'-5'-exoribonuclease family protein.	0.901
A0A251SBT0	A0A251S071	A0A251SBT0	A0A251S071	Putative nucleic acid-binding, OB-fold-like protein.	Putative polyribonucleotide nucleotidyltransferase, PNPase/RNase PH domain protein.	0.995
A0A251SBT0	A0A251SGC7	A0A251SBT0	A0A251SGC7	Putative nucleic acid-binding, OB-fold-like protein.	Putative sas10/U3 ribonucleoprotein (Utp) family protein.	0.978
A0A251SBT0	A0A251SKY7	A0A251SBT0	A0A251SKY7	Putative nucleic acid-binding, OB-fold-like protein.	Putative transducin/WD40 repeat-like superfamily protein.	0.981
A0A251SBT0	A0A251STQ5	A0A251SBT0	A0A251STQ5	Putative nucleic acid-binding, OB-fold-like protein.	Putative sas10/Utp3/C1D family.	0.998
A0A251SBT0	A0A251THX0	A0A251SBT0	A0A251THX0	Putative nucleic acid-binding, OB-fold-like protein.	Putative HRDC domain-containing protein.	0.985
A0A251SBT0	A0A251UJ25	A0A251SBT0	A0A251UJ25	Putative nucleic acid-binding, OB-fold-like protein.	Putative 3'-5'-exoribonuclease family protein.	0.996
A0A251SBT0	A0A251VJW5	A0A251SBT0	A0A251VJW5	Putative nucleic acid-binding, OB-fold-like protein.	Putative U3 ribonucleoprotein (Utp) family protein.	0.978
A0A251SBT0	A0A251VTL3	A0A251SBT0	A0A251VTL3	Putative nucleic acid-binding, OB-fold-like protein.	Putative ribosomal protein S5 domain 2-like superfamily protein.	0.998
A0A251SBT0	ATRRP4	A0A251SBT0	A0A251S501	Putative nucleic acid-binding, OB-fold-like protein.	Putative ribosomal RNA processing 4.	0.998
A0A251SBT0	CER7	A0A251SBT0	A0A251SUY6	Putative nucleic acid-binding, OB-fold-like protein.	Putative 3'-5'-exoribonuclease family protein.	0.995