STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TID0Putative nucleotide-binding alpha-beta plait domain-containing protein. (139 aa)    
Predicted Functional Partners:
ATU2AF35B
Putative zinc finger C-x8-C-x5-C-x3-H type family protein.
   
 0.973
U2AFA
Putative splicing factor U2af small subunit A.
   
 0.973
A0A251VRT2
Putative RNA recognition motif domain, eukaryote.
   
 0.973
A0A251V0J9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
  
  
0.931
A0A251TBN1
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
  
  
 
0.901
A0A251T768
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
  
  
 
0.900
U2A2B
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
  
  
 
0.900
A0A251UL47
Putative U2 auxiliary factor small subunit.
  
 0.898
SF3B1
Putative U2 snRNP component prp10.
   
 0.878
A0A251VKM7
Putative splicing factor, putative.
   
 0.878
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.