STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TMU6Putative transcription factor GRAS; Belongs to the GRAS family. (602 aa)    
Predicted Functional Partners:
UPL4
Putative ubiquitin-protein ligase 4.
   
 0.770
A0A251T2K4
Uncharacterized protein.
   
 0.759
KAK
Putative ubiquitin-transferase.
   
 0.759
A0A251TUF5
Uncharacterized protein.
   
 0.759
A0A251UYU0
Putative HECT domain, Armadillo-type fold protein.
   
 0.759
A0A251RQ30
Putative transducin/WD40 repeat-like superfamily protein.
    
 0.655
APC10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.649
A0A251URZ4
Putative NAD(P)-binding Rossmann-fold superfamily protein.
   
 0.646
A0A251RSI4
Ubiquitin thioesterase.
    
 0.643
A0A251TIF2
ANAPC5 domain-containing protein.
    
 0.635
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.