STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATARP6Putative actin-related protein 6; Belongs to the actin family. (475 aa)    
Predicted Functional Partners:
A0A251UGZ2
Putative myb-like transcription factor family protein.
   
 0.905
A0A251TG92
Putative SNF2-related, N-terminal domain-containing protein.
    
 0.901
PIE1
Putative SNF2 domain-containing protein / helicase domain-containing protein.
    
 0.901
ATSWC6
Putative HIT-type Zinc finger family protein.
    
 0.900
ARP5
Putative actin-related protein 5; Belongs to the actin family.
    
0.872
ATTIP49A
RuvB-like helicase; Belongs to the RuvB family.
    
 0.871
A0A251TGP3
RuvB-like helicase.
    
 0.871
ARP9
Putative actin-related protein 9; Belongs to the actin family.
    
 0.862
A0A251S1U5
Actin-related protein 2/3 complex subunit; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.859
ARPC3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.853
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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