STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TXD2Putative phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding protein. (106 aa)    
Predicted Functional Partners:
SYFB
Putative phenylalanine--tRNA ligase beta subunit.
  
 0.951
A0A251UKF4
tRNA_synthFbeta domain-containing protein.
  
 0.951
A0A251V9S4
Putative tRNA synthetase beta subunit family protein.
  
 0.951
A0A251RYE1
Putative aspartate-tRNA ligase.
  
  
 0.665
A0A251V5G1
Putative tRNA synthetase class II (D, K and N) family protein.
  
  
 0.665
A0A251U6L2
Tyrosine--tRNA ligase.
  
  
 0.655
A0A251RZW6
Putative tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.644
SYM
Putative methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.615
A0A251TB02
Putative rossmann-like alpha/beta/alpha sandwich fold, Methionyl/Leucyl tRNA synthetase.
  
  
 0.615
A0A251VL00
Putative arginine-tRNA ligase, Methionyl/Leucyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.615
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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