STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251U115Putative oxidoreductase, 2OG-Fe(II) oxygenase family protein. (359 aa)    
Predicted Functional Partners:
A0A251RUG3
Putative cytochrome P450; Belongs to the cytochrome P450 family.
      
 0.588
A0A251UN47
Putative oxoglutarate/iron-dependent dioxygenase.
      
 0.586
A0A251U123
Putative rubber elongation factor.
      
 0.525
MTND1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
      
 0.507
A0A251TYE2
Putative alkylated DNA repair protein AlkB.
  
   
 0.495
A0A251UG47
Putative alkylated DNA repair protein AlkB.
  
     0.486
A0A251V020
Putative alkylated DNA repair protein AlkB.
  
   
 0.476
A0A251S3J8
Putative alkylated DNA repair protein AlkB.
  
     0.474
A0A251RQ43
Putative alkylated DNA repair protein AlkB.
  
     0.470
A0A251UER0
Putative alkylated DNA repair protein AlkB.
  
     0.464
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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