STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251U3M2Putative C2 domain-containing protein. (209 aa)    
Predicted Functional Partners:
A0A251VJW5
Putative U3 ribonucleoprotein (Utp) family protein.
   
 0.812
A0A251SB54
Putative transducin/WD40 repeat-like superfamily protein.
    
 0.795
A0A251UTS7
Putative transducin/WD40 repeat-like superfamily protein.
    
 0.795
A0A251TNY2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.761
A0A251SGC7
Putative sas10/U3 ribonucleoprotein (Utp) family protein.
   
 0.758
A0A251UG72
Putative ubiquitin-like superfamily protein.
    
 0.756
THO2
Putative THO2.
   
 0.752
A0A251TZY4
Putative Nrap-like protein.
   
 0.744
A0A251RSE3
Putative CBF1-interacting co-repressor CIR,Pre-mRNA splicing factor.
    
 0.739
A0A251V2H0
Putative transducin/WD40 repeat-like superfamily protein.
   
 0.739
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.