STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251U7I9Putative reverse transcriptase domain, Zinc finger, CCHC-type. (456 aa)    
Predicted Functional Partners:
A0A251TU19
Putative translation protein SH3-like family protein.
   
   0.563
A0A251TVD9
Putative ribosomal protein L21e.
   
   0.563
RL21A
Putative 60S ribosomal protein L21-A.
   
   0.563
A0A251TSL2
Putative ribosomal protein L39 family protein.
   
   0.470
A0A251UNF7
Putative ribosomal protein L39e.
   
   0.470
A0A251V790
Putative ribosomal protein L2.
   
 
 0.421
A0A251TTX5
Uncharacterized protein.
    
 0.415
A0A251T1M1
Putative reverse transcriptase domain-containing protein.
  
     0.404
A0A251UKK8
Putative ribosomal protein L40e.
    
  0.403
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.