STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251U8C2Putative tRNA/rRNA methyltransferase (SpoU) family protein. (223 aa)    
Predicted Functional Partners:
A0A251RUG9
Putative lojap-related protein.
   
 
 0.894
A0A251T4D7
Putative pseudouridine synthase family protein.
   
 
 0.854
A0A251UST0
Putative ribosomal protein L29, Ribosomal protein L47.
   
 
 0.845
A0A251UX28
Putative ribosomal protein L29, Ribosomal protein L47.
   
 
 0.845
A0A251TI55
Putative ribosomal protein L51/S25/CI-B8 family protein.
    
   0.794
A0A251TXF6
Putative ribosomal protein/NADH dehydrogenase domain, Thioredoxin-like fold protein.
    
   0.794
A0A251T4E1
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
  
 
 0.747
A0A251VHK3
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
  
 
 0.747
A0A251VN96
Putative GTP binding domain-containing protein.
  
 
 0.747
A0A251TNM9
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
  
 
 0.737
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.