STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UAJ8Putative UBX domain-containing protein. (460 aa)    
Predicted Functional Partners:
A0A251TA89
Putative nuclear pore localization protein NPL4.
    
 
 0.890
A0A251U3W2
Putative transducin family protein / WD-40 repeat family protein.
   
 
 0.870
A0A251T4J0
Uncharacterized protein.
    
 
 0.728
A0A251T5H5
Putative methyltransferase family protein.
    
 
 0.728
A0A251TJE7
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.728
A0A251SBK3
Putative zinc finger, RING/FYVE/PHD-type, Ubiquitin conjugation factor E4, core.
    
 
 0.704
A0A251TT63
Putative mannose-6-phosphate receptor binding domain-containing protein.
    
 
 0.704
A0A251TXB6
Putative U-box domain-containing protein.
    
 
 0.704
A0A251V403
PRKCSH domain-containing protein.
    
 
 0.704
A0A251V5H4
Uncharacterized protein.
    
 
 0.704
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.