STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UAV7Putative OTU-like cysteine protease family protein. (188 aa)    
Predicted Functional Partners:
A0A251U3W2
Putative transducin family protein / WD-40 repeat family protein.
    
 
 0.960
A0A251TA89
Putative nuclear pore localization protein NPL4.
    
 
 0.955
A0A251SBK3
Putative zinc finger, RING/FYVE/PHD-type, Ubiquitin conjugation factor E4, core.
    
 
 0.929
A0A251TXB6
Putative U-box domain-containing protein.
    
 
 0.929
PUX4
Putative plant UBX domain containing protein 4.
   
 
 0.920
PUX5
Putative serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma.
   
 
 0.920
BPC4
Putative basic pentacysteine 4.
   
 
 0.875
A0A251SL58
Putative ubiquitin fusion degradation protein UFD1.
   
 
 0.875
UFD1
Putative ubiquitin fusion degradation 1.
   
 
 0.875
A0A251TPK2
Putative ubiquitin fusion degradation protein UFD1.
   
 
 0.875
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.