STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UC39Putative CBF1-interacting co-repressor CIR, N-terminal domain-containing protein. (434 aa)    
Predicted Functional Partners:
A0A251RSE3
Putative CBF1-interacting co-repressor CIR,Pre-mRNA splicing factor.
   
 
 0.911
A0A251VK85
Putative NF-kappa-B-activating protein/UPF0396.
   
 
 0.795
A0A251S4L9
Putative RNA helicase HrpA.
   
 
 0.716
A0A251T5N3
Putative RNA helicase family protein.
   
 
 0.716
A0A251V6R9
Putative helicase-associated domain, P-loop containing nucleoside triphosphate hydrolase.
   
 
 0.716
SKIP
Putative chromatin protein family.
   
 
 0.694
A0A251U1K2
Putative SKI-interacting protein, SKIP.
   
 
 0.694
A0A251U206
Putative SKI-interacting protein, SKIP.
   
 
 0.694
A0A251U2J9
Putative SKI-interacting protein SKIP, SNW domain-containing protein.
   
 
 0.694
A0A251UFU8
Putative SKI-interacting protein, SKIP.
   
 
 0.694
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.