A0A251UDR7 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251UDR7

Putative leucine-rich repeat protein, plant-type. (1090 aa)

Predicted Functional Partners:

A0A251UVA8

0.478

A0A251TS59

0.476

A0A251RV29

0.448

A0A251TSS7

0.446

A0A251TST8

0.437

A0A251TR57

0.436

A0A251VTQ0

0.428

A0A251TPT3

0.425

A0A251SG90

0.422

A0A251UX23

0.422

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A251RV29	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.448
A0A251SG90	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.422
A0A251TPT3	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.425
A0A251TR57	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.436
A0A251TS59	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.476
A0A251TSS7	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.446
A0A251TST8	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.437
A0A251UDR7	A0A251RV29	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.448
A0A251UDR7	A0A251SG90	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.422
A0A251UDR7	A0A251TPT3	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.425
A0A251UDR7	A0A251TR57	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.436
A0A251UDR7	A0A251TS59	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.476
A0A251UDR7	A0A251TSS7	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.446
A0A251UDR7	A0A251TST8	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.437
A0A251UDR7	A0A251UVA8	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.478
A0A251UDR7	A0A251UX23	Putative leucine-rich repeat protein, plant-type.	Putative leucine-rich repeat domain, L domain-like protein.	0.422
A0A251UDR7	A0A251VTQ0	Putative leucine-rich repeat protein, plant-type.	Putative NB-ARC; Belongs to the disease resistance NB-LRR family.	0.428
A0A251UVA8	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.478
A0A251UX23	A0A251UDR7	Putative leucine-rich repeat domain, L domain-like protein.	Putative leucine-rich repeat protein, plant-type.	0.422
A0A251VTQ0	A0A251UDR7	Putative NB-ARC; Belongs to the disease resistance NB-LRR family.	Putative leucine-rich repeat protein, plant-type.	0.428