A0A251UE31 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251UE31

Putative copper-resistance protein CopA. (594 aa)

Predicted Functional Partners:

A0A251S9P9

0.507

A0A251S4C5

0.506

A0A251THJ7

0.506

IF1A

0.495

A0A251V290

0.495

PLAS

0.483

A0A251TBB1

0.464

SAR2

0.464

A0A251VQF5

0.446

PSAF

0.407

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251S4C5	A0A251TBB1	A0A251S4C5	A0A251TBB1	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251S4C5	A0A251THJ7	A0A251S4C5	A0A251THJ7	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251S4C5	A0A251UE31	A0A251S4C5	A0A251UE31	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	Putative copper-resistance protein CopA.	0.506
A0A251S4C5	A0A251V290	A0A251S4C5	A0A251V290	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	Putative translation initiation factor 1A (eIF-1A), RNA-binding domain, S1, IF1 type; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.416
A0A251S4C5	IF1A	A0A251S4C5	A0A251SCQ0	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	Putative eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.416
A0A251S4C5	SAR2	A0A251S4C5	A0A251V7X5	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	Putative GTP-binding protein SAR2; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251S9P9	A0A251UE31	A0A251S9P9	A0A251UE31	Putative cupredoxin; Belongs to the multicopper oxidase family.	Putative copper-resistance protein CopA.	0.507
A0A251S9P9	A0A251VQF5	A0A251S9P9	A0A251VQF5	Putative cupredoxin; Belongs to the multicopper oxidase family.	Putative AMP-dependent synthetase and ligase family protein.	0.446
A0A251S9P9	PLAS	A0A251S9P9	A0A251UQN3	Putative cupredoxin; Belongs to the multicopper oxidase family.	Plastocyanin; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. Belongs to the plastocyanin family.	0.483
A0A251TBB1	A0A251S4C5	A0A251TBB1	A0A251S4C5	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251TBB1	A0A251THJ7	A0A251TBB1	A0A251THJ7	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251TBB1	A0A251UE31	A0A251TBB1	A0A251UE31	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	Putative copper-resistance protein CopA.	0.464
A0A251TBB1	A0A251V290	A0A251TBB1	A0A251V290	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	Putative translation initiation factor 1A (eIF-1A), RNA-binding domain, S1, IF1 type; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.402
A0A251TBB1	IF1A	A0A251TBB1	A0A251SCQ0	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	Putative eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.402
A0A251TBB1	SAR2	A0A251TBB1	A0A251V7X5	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	Putative GTP-binding protein SAR2; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251THJ7	A0A251S4C5	A0A251THJ7	A0A251S4C5	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	GTP-binding protein SAR1A-like; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251THJ7	A0A251TBB1	A0A251THJ7	A0A251TBB1	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	Putative ras-related small GTP-binding family protein; Belongs to the small GTPase superfamily. SAR1 family.	0.543
A0A251THJ7	A0A251UE31	A0A251THJ7	A0A251UE31	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	Putative copper-resistance protein CopA.	0.506
A0A251THJ7	A0A251V290	A0A251THJ7	A0A251V290	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	Putative translation initiation factor 1A (eIF-1A), RNA-binding domain, S1, IF1 type; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.416
A0A251THJ7	IF1A	A0A251THJ7	A0A251SCQ0	GTP-binding protein SAR1A; Belongs to the small GTPase superfamily. SAR1 family.	Putative eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.416