STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UHM4Putative fatty acid desaturase. (377 aa)    
Predicted Functional Partners:
A0A251VJF2
Putative Beta-Casp domain containing protein.
    
 0.599
A0A251RQ18
Putative cleavage and polyadenylation specificity factor 73 kDa subunit-II.
    
 0.580
A0A251T3X6
Putative ARM repeat superfamily protein.
    
 0.542
A0A251SES8
Putative integrator complex subunit 3.
    
 0.488
A0A251TQD1
Putative embryo defective protein.
    
 0.488
A0A251T124
Putative ARM repeat superfamily protein.
    
 0.487
A0A251V1T2
Putative armadillo-type fold protein.
    
 0.487
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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