STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UMP7Putative RNA-directed DNA polymerase, eukaryota. (1742 aa)    
Predicted Functional Partners:
A0A251TU19
Putative translation protein SH3-like family protein.
   
   0.563
A0A251TVD9
Putative ribosomal protein L21e.
   
   0.563
RL21A
Putative 60S ribosomal protein L21-A.
   
   0.563
A0A251TSL2
Putative ribosomal protein L39 family protein.
   
   0.470
A0A251UNF7
Putative ribosomal protein L39e.
   
   0.470
A0A251V790
Putative ribosomal protein L2.
   
 
 0.421
A0A251TTX5
Uncharacterized protein.
    
 0.415
A0A251UKK8
Putative ribosomal protein L40e.
    
  0.403
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.