STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UPM2Putative TRAF-like family protein. (1660 aa)    
Predicted Functional Partners:
A0A251T295
Putative RNA-binding (RRM/RBD/RNP motifs) family protein.
      
 0.604
RUS4
Uncharacterized protein.
      
 0.593
OXP1
Putative oxoprolinase 1.
      
 0.582
A0A251SPZ2
Putative zinc finger C2H2-type/integrase DNA-binding domain-containing protein.
   
 0.528
A0A251VJJ9
Putative zinc finger, C2H2-like protein.
   
 0.528
A0A251UW09
Putative zinc finger, PHD-type.
  
   0.500
A0A251S4T1
Putative ARM repeat superfamily protein.
  
     0.493
A0A251VF52
Putative zinc finger, RING/FYVE/PHD-type, Methyltransferase, trithorax.
  
   0.493
A0A251SBY5
Putative armadillo-type fold protein.
  
     0.492
A0A251S1K4
Putative zinc finger, C2H2-like protein.
   
 0.491
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.