STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251USZ4Putative yjgF/YER057c/UK114 family, Endoribonuclease L-PSP/chorismate mutase-like protein. (184 aa)    
Predicted Functional Partners:
RRP41
Putative 3'-5'-exoribonuclease family protein.
  
 
 0.726
A0A251SJS9
Putative 3'-5'-exoribonuclease family protein.
  
 
 0.726
A0A251TUP5
Putative rcd1/Caf40.
    
 
 0.705
A0A251U947
Putative rcd1/Caf40, Armadillo-type fold protein.
    
 
 0.705
A0A251UUT9
Putative cell differentiation, Rcd1-like protein.
    
 
 0.705
A0A251VTL3
Putative ribosomal protein S5 domain 2-like superfamily protein.
  
 
 0.642
A0A251RLU2
Putative 3'-5'-exoribonuclease family protein.
    
   0.623
A0A251S502
Putative exoribonuclease, phosphorolytic domain 2.
    
   0.623
RRP42
Putative exosome complex component Rrp42.
    
   0.623
A0A251SC58
Putative translation elongation factor EFG/EF2.
   
 0.617
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.