A0A251UTU1 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251UTU1

Putative pentatricopeptide repeat (PPR) superfamily protein. (1121 aa)

Predicted Functional Partners:

A0A251VEK1

0.525

A0A251VK97

0.523

A0A251UZ08

0.520

YLS8

0.519

AR401

0.507

A0A251TE40

0.485

A0A251THN9

0.485

UPL7

0.445

A0A251TJZ7

0.445

A0A251S6D8

0.438

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251S6D8	A0A251UTU1	A0A251S6D8	A0A251UTU1	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.	Putative pentatricopeptide repeat (PPR) superfamily protein.	0.438
A0A251S6D8	A0A251VEK1	A0A251S6D8	A0A251VEK1	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.	Uncharacterized protein.	0.410
A0A251S6D8	A0A251VK97	A0A251S6D8	A0A251VK97	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.	Uncharacterized protein.	0.408
A0A251TE40	A0A251UTU1	A0A251TE40	A0A251UTU1	Uncharacterized protein.	Putative pentatricopeptide repeat (PPR) superfamily protein.	0.485
A0A251TE40	A0A251VEK1	A0A251TE40	A0A251VEK1	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A251THN9	A0A251UTU1	A0A251THN9	A0A251UTU1	Uncharacterized protein.	Putative pentatricopeptide repeat (PPR) superfamily protein.	0.485
A0A251THN9	A0A251VEK1	A0A251THN9	A0A251VEK1	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A251TJZ7	A0A251UTU1	A0A251TJZ7	A0A251UTU1	Uncharacterized protein.	Putative pentatricopeptide repeat (PPR) superfamily protein.	0.445
A0A251TJZ7	A0A251VEK1	A0A251TJZ7	A0A251VEK1	Uncharacterized protein.	Uncharacterized protein.	0.438
A0A251TJZ7	A0A251VK97	A0A251TJZ7	A0A251VK97	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A251TJZ7	YLS8	A0A251TJZ7	A0A251U1N2	Uncharacterized protein.	Putative mRNA splicing factor, thioredoxin-like U5 snRNP.	0.410
A0A251UTU1	A0A251S6D8	A0A251UTU1	A0A251S6D8	Putative pentatricopeptide repeat (PPR) superfamily protein.	Putative S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.	0.438
A0A251UTU1	A0A251TE40	A0A251UTU1	A0A251TE40	Putative pentatricopeptide repeat (PPR) superfamily protein.	Uncharacterized protein.	0.485
A0A251UTU1	A0A251THN9	A0A251UTU1	A0A251THN9	Putative pentatricopeptide repeat (PPR) superfamily protein.	Uncharacterized protein.	0.485
A0A251UTU1	A0A251TJZ7	A0A251UTU1	A0A251TJZ7	Putative pentatricopeptide repeat (PPR) superfamily protein.	Uncharacterized protein.	0.445
A0A251UTU1	A0A251UZ08	A0A251UTU1	A0A251UZ08	Putative pentatricopeptide repeat (PPR) superfamily protein.	Putative TIP41-like family protein.	0.520
A0A251UTU1	A0A251VEK1	A0A251UTU1	A0A251VEK1	Putative pentatricopeptide repeat (PPR) superfamily protein.	Uncharacterized protein.	0.525
A0A251UTU1	A0A251VK97	A0A251UTU1	A0A251VK97	Putative pentatricopeptide repeat (PPR) superfamily protein.	Uncharacterized protein.	0.523
A0A251UTU1	AR401	A0A251UTU1	A0A251TWW3	Putative pentatricopeptide repeat (PPR) superfamily protein.	Protein-lysine N-methyltransferase HannXRQ_Chr09g0262441; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.507
A0A251UTU1	UPL7	A0A251UTU1	A0A251SRP5	Putative pentatricopeptide repeat (PPR) superfamily protein.	Putative ubiquitin-protein ligase 7.	0.445