STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6PKPutative D6 protein kinase. (540 aa)    
Predicted Functional Partners:
SEC6
Putative SEC6.
      
 0.497
AHP4
Putative HPT phosphotransmitter 4.
      
 0.497
WEI8
Putative tryptophan aminotransferase.
      
 0.497
BRL3
Putative BRI1-like 3; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.493
MYB88
Putative myb domain protein 88.
      
 0.469
CRF6
Putative cytokinin response factor 6.
      
 0.463
AXR1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
      
 0.463
WUS
Homeobox domain-containing protein.
      
 0.459
AHK2
Putative histidine kinase 2.
      
 0.429
GH3.6
Putative auxin-responsive GH3 family protein.
      
 0.420
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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