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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UW16Putative toll-like receptor, Leucine-rich repeat domain, L domain-like protein. (352 aa)    
Predicted Functional Partners:
HD1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.840
HDA9
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.840
HDA6
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.840
HDAC1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.840
A0A251SKU2
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
   
 0.839
A0A251UCK5
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
   
 0.839
A0A251RR84
Putative SNF2-related, N-terminal domain-containing protein.
    
 0.833
A0A251V685
Uncharacterized protein.
    
 0.833
A0A251RYG7
Putative phox (PX) domain-containing protein.
    
 0.804
A0A251SMH7
Putative SANT/Myb domain, Homeodomain-like protein.
    
 0.804
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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