STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UXH6Glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1. (254 aa)    
Predicted Functional Partners:
ENS
Putative ARM repeat superfamily protein.
    
 0.608
A0A251TNY2
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.537
A0A251SRB3
Putative nucleotide-binding alpha-beta plait domain-containing protein.
  
     0.534
A0A251THR9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
  
 
 0.533
A0A251VKU0
Putative nucleotide-binding alpha-beta plait domain-containing protein.
  
 
 0.508
A0A251T9C0
Putative RNA-binding (RRM/RBD/RNP motifs) family protein.
  
     0.487
A0A251RLL4
Dynein light chain.
   
    0.485
A0A251SZH8
Dynein light chain.
   
    0.485
A0A251VB81
Dynein light chain.
   
    0.485
A0A251UFH5
Putative nucleotide-binding alpha-beta plait domain-containing protein.
  
     0.481
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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