STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROF1Peptidylprolyl isomerase. (568 aa)    
Predicted Functional Partners:
A0A251S6H8
Putative HSP20-like chaperone.
   
 0.574
A0A251T6K9
Putative HSP20-like chaperone.
   
 0.574
A0A251TJJ6
Putative HSP20-like chaperone.
   
 0.574
A0A251V1H7
Putative HSP20-like chaperone.
   
 0.574
A0A251VSR9
Putative HSP20-like chaperones superfamily protein.
   
 0.574
TPR10
Putative ankyrin repeat family protein.
   
 0.572
A0A251SM99
Putative heat shock protein Hsp90 family.
   
 0.568
HSP81-2
Putative heat shock protein 81-2.
   
 0.568
HSP83
Putative heat shock protein 81-3.
   
 0.568
A0A251V8U0
Putative heat shock protein Hsp90 family.
   
 0.568
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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