A0A251V2J0 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251V2J0

ABC1 domain-containing protein. (682 aa)

Predicted Functional Partners:

NDF1

0.558

COQ3

0.506

UBIG

0.506

CHLM

0.506

UBIG-2

0.506

A0A251U0G3

0.506

A0A251SZK6

0.452

TC

0.410

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251SZK6	A0A251U0G3	A0A251SZK6	A0A251U0G3	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	Putative magnesium-protoporphyrin IX methyltransferase.	0.729
A0A251SZK6	A0A251V2J0	A0A251SZK6	A0A251V2J0	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	ABC1 domain-containing protein.	0.452
A0A251SZK6	CHLM	A0A251SZK6	A0A251TGT8	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	Putative magnesium-protoporphyrin IX methyltransferase.	0.729
A0A251SZK6	COQ3	A0A251SZK6	A0A251SP55	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.729
A0A251SZK6	UBIG	A0A251SZK6	A0A251T1S8	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.729
A0A251SZK6	UBIG-2	A0A251SZK6	A0A251TME5	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.729
A0A251U0G3	A0A251SZK6	A0A251U0G3	A0A251SZK6	Putative magnesium-protoporphyrin IX methyltransferase.	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	0.729
A0A251U0G3	A0A251V2J0	A0A251U0G3	A0A251V2J0	Putative magnesium-protoporphyrin IX methyltransferase.	ABC1 domain-containing protein.	0.506
A0A251U0G3	CHLM	A0A251U0G3	A0A251TGT8	Putative magnesium-protoporphyrin IX methyltransferase.	Putative magnesium-protoporphyrin IX methyltransferase.	0.900
A0A251V2J0	A0A251SZK6	A0A251V2J0	A0A251SZK6	ABC1 domain-containing protein.	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	0.452
A0A251V2J0	A0A251U0G3	A0A251V2J0	A0A251U0G3	ABC1 domain-containing protein.	Putative magnesium-protoporphyrin IX methyltransferase.	0.506
A0A251V2J0	CHLM	A0A251V2J0	A0A251TGT8	ABC1 domain-containing protein.	Putative magnesium-protoporphyrin IX methyltransferase.	0.506
A0A251V2J0	COQ3	A0A251V2J0	A0A251SP55	ABC1 domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.506
A0A251V2J0	NDF1	A0A251V2J0	A0A251U8A9	ABC1 domain-containing protein.	Putative NDH-dependent cyclic electron flow 1.	0.558
A0A251V2J0	TC	A0A251V2J0	Q2XV80	ABC1 domain-containing protein.	Tocopherol cyclase.	0.410
A0A251V2J0	UBIG	A0A251V2J0	A0A251T1S8	ABC1 domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.506
A0A251V2J0	UBIG-2	A0A251V2J0	A0A251TME5	ABC1 domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.506
CHLM	A0A251SZK6	A0A251TGT8	A0A251SZK6	Putative magnesium-protoporphyrin IX methyltransferase.	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	0.729
CHLM	A0A251U0G3	A0A251TGT8	A0A251U0G3	Putative magnesium-protoporphyrin IX methyltransferase.	Putative magnesium-protoporphyrin IX methyltransferase.	0.900
CHLM	A0A251V2J0	A0A251TGT8	A0A251V2J0	Putative magnesium-protoporphyrin IX methyltransferase.	ABC1 domain-containing protein.	0.506