STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFC5Putative nucleosome/chromatin assembly factor group C5. (487 aa)    
Predicted Functional Partners:
HAG2
Putative histone acetyltransferase of the GNAT family 2.
   
 0.945
A0A251SKU2
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
   
 0.905
A0A251UCK5
Putative jmjC domain, JmjN domain, Zinc finger C2H2-type/integrase DNA-binding domain protein.
   
 0.905
A0A251TYJ7
Putative nucleic acid binding protein.
    
 0.822
EEDA
Putative polycomb protein eed-A.
    
 0.820
FIE2
Putative polycomb group protein FIE2.
    
 0.820
A0A251TT99
Putative WD40/YVTN repeat-like-containing domain-containing protein.
    
 0.820
A0A251T527
Putative SANT/Myb domain, Homeodomain-like, Protein LIN-9/Protein ALWAYS EARLY.
    
 0.818
ATALY3
Putative DNA binding protein.
    
 0.818
HDA6
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.818
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.