STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251V5A8Putative RNA-metabolising metallo-beta-lactamase family protein. (848 aa)    
Predicted Functional Partners:
CPSF30
Putative cleavage and polyadenylation specificity factor 30.
   
 0.995
A0A251RY24
Uncharacterized protein.
   
 0.989
A0A251SNS1
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.989
CSTF64
Putative cleavage stimulating factor 64.
   
 0.984
A0A251SE46
Putative ssu72-like family protein.
   
 0.983
CSTF77
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
   
 0.982
ESP4
Putative HEAT repeat-containing protein.
   
 0.978
A0A251VGA1
Putative armadillo-type fold, Symplekin/Pta1.
   
 0.978
A0A251S403
Putative WD40/YVTN repeat-like-containing domain-containing protein.
   
 0.976
FY
Putative transducin/WD40 repeat-like superfamily protein.
   
 0.976
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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