STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPC6APutative trafficking protein particle complex subunit 6A. (171 aa)    
Predicted Functional Partners:
A0A251SPM8
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.990
A0A251VJI2
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
   
 0.990
A0A251UQU5
Uncharacterized protein.
   
 0.988
A0A251V9L0
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.988
A0A251S8F1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.985
A0A251TCK1
Putative transport protein particle (TRAPP) component.
   
 0.985
A0A251VJ70
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.985
TPPC5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.985
A0A251SR81
Putative tetratricopeptide-like helical domain-containing protein.
    
 0.984
CLUB
Putative CLUB.
    
 0.984
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.