A0A251VAR3 protein (Helianthus annuus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A251VAR3

Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily. (339 aa)

Predicted Functional Partners:

A0A251TQ41

0.847

P2C06

0.847

HAB1

0.847

A0A251SBW4

0.845

ABI2

0.804

A0A251U0K7

0.804

A0A251SAZ2

0.802

HAI2

0.802

A0A251UNA0

0.802

A0A251TP95

0.743

Your Current Organism:

Helianthus annuus

NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A251SAZ2	A0A251VAR3	A0A251SAZ2	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.802
A0A251SBW4	A0A251VAR3	A0A251SBW4	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.845
A0A251TP95	A0A251VAR3	A0A251TP95	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.743
A0A251TQ41	A0A251VAR3	A0A251TQ41	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.847
A0A251U0K7	A0A251VAR3	A0A251U0K7	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.804
A0A251UNA0	A0A251VAR3	A0A251UNA0	A0A251VAR3	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.802
A0A251VAR3	A0A251SAZ2	A0A251VAR3	A0A251SAZ2	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.802
A0A251VAR3	A0A251SBW4	A0A251VAR3	A0A251SBW4	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.845
A0A251VAR3	A0A251TP95	A0A251VAR3	A0A251TP95	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.743
A0A251VAR3	A0A251TQ41	A0A251VAR3	A0A251TQ41	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.847
A0A251VAR3	A0A251U0K7	A0A251VAR3	A0A251U0K7	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.804
A0A251VAR3	A0A251UNA0	A0A251VAR3	A0A251UNA0	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative PPM-type phosphatase domain, Protein phosphatase 2C family.	0.802
A0A251VAR3	ABI2	A0A251VAR3	A0A251TQT8	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.804
A0A251VAR3	HAB1	A0A251VAR3	A0A251U1I6	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative ABI1-like protein.	0.847
A0A251VAR3	HAI2	A0A251VAR3	A0A251SSF2	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	Putative highly ABA-induced PP2C protein.	0.802
A0A251VAR3	P2C06	A0A251VAR3	A0A251TU99	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	PPM-type phosphatase domain-containing protein.	0.847
ABI2	A0A251VAR3	A0A251TQT8	A0A251VAR3	PPM-type phosphatase domain-containing protein.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.804
HAB1	A0A251VAR3	A0A251U1I6	A0A251VAR3	Putative ABI1-like protein.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.847
HAI2	A0A251VAR3	A0A251SSF2	A0A251VAR3	Putative highly ABA-induced PP2C protein.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.802
P2C06	A0A251VAR3	A0A251TU99	A0A251VAR3	PPM-type phosphatase domain-containing protein.	Putative rho-associated protein kinase 1/2; Belongs to the protein kinase superfamily.	0.847