STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VB64Putative aconitase/isopropylmalate dehydratase. (139 aa)    
Predicted Functional Partners:
A0A251S0T0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.879
CYSZ
Citrate synthase.
  
 0.879
CSY2
Citrate synthase.
  
 0.879
A0A251VRK6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.879
A0A251TUX6
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.860
A0A251S4C1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.852
IDHC
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.852
A0A251SHD1
Putative ARID DNA-binding domain-containing protein.
  
 0.844
A0A251TS84
Putative translation elongation factor EF1B/ribosomal protein S6 family protein.
   
 
 0.828
A0A251UJC4
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.827
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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