STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VC82Putative outer arm dynein light chain 1 protein. (1038 aa)    
Predicted Functional Partners:
A0A251SM82
Putative DNA methylase, N-6 adenine-specific, conserved site.
      
 0.535
A0A251RWQ0
Putative peptidase A22B, signal peptide peptidase.
   
    0.499
SPPL4
Putative SIGNAL PEPTIDE PEPTIDASE-LIKE 4.
   
    0.499
CUTA
Putative nitrogen regulatory PII-like, alpha/beta.
      
 0.499
A0A251UF14
Putative PA domain, Presenilin/signal peptide peptidase.
   
    0.499
A0A251UGU9
Putative PA domain, Presenilin/signal peptide peptidase.
   
    0.499
SPPL3
Putative SIGNAL PEPTIDE PEPTIDASE-LIKE 3.
   
    0.499
A0A251VL15
Putative peptidase A22B, signal peptide peptidase.
   
    0.499
A0A251TBB8
Putative RNA methyltransferase family protein.
      
 0.471
A0A251SM27
Putative 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.
      
 0.451
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.