STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VCG4Putative nucleic acid-binding, OB-fold protein. (187 aa)    
Predicted Functional Partners:
A0A251SES8
Putative integrator complex subunit 3.
    
 0.963
A0A251TQD1
Putative embryo defective protein.
    
 0.963
A0A251VJF2
Putative Beta-Casp domain containing protein.
    
 0.762
A0A251SE46
Putative ssu72-like family protein.
   
 
  0.752
A0A251RQ18
Putative cleavage and polyadenylation specificity factor 73 kDa subunit-II.
   
 0.743
A0A251T124
Putative ARM repeat superfamily protein.
     
 0.692
A0A251V1T2
Putative armadillo-type fold protein.
     
 0.692
RPAB3
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.656
A0A251TIN4
Putative RNA polymerase Rpb8; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.656
A0A251VSM3
Putative RNA polymerase, Rpb8.
   
 
  0.656
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.