STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251VCL7Putative TRAF-like protein. (226 aa)    
Predicted Functional Partners:
A0A251SG72
Putative ARID DNA-binding domain, High mobility group box domain protein.
    
 
 0.633
A0A251V2B6
Putative ARID DNA-binding domain, High mobility group box domain protein.
    
 
 0.633
A0A251V8Z4
Putative ARID DNA-binding domain, High mobility group box domain protein.
    
 
 0.633
A0A251TLN4
Putative ribosomal protein L23/L15e family protein.
    
   0.449
DECOY
Putative decoy.
    
   0.449
A0A251UZ72
Putative ribosomal protein L33, Zinc-binding ribosomal protein.
    
   0.449
A0A251SS95
Putative histone-fold protein.
    
 0.436
A0A251UU92
Putative histone-fold protein.
    
 0.436
A0A251SIU9
Putative F-box domain, Coatomer alpha subunit.
    
  0.431
TAF5
Putative TBP-associated factor 5.
    
  0.431
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.